CCDC54

Across TCGA cell cohorts, CCDC54 RNA expression is significantly associated with the RNA expression of many other genes, with 2,563 significant associations in total. BREAST shows the largest number of these associations.

The most reproducible CCDC54-associated genes across cancer lineages are RNF115, TUBA1A, and POLR3GL. Each is linked with CCDC54 in more than 3 cancer types. Because this analysis shows association rather than direction, both CCDC54-to-partner and partner-to-CCDC54 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CCDC54 versus RNF115 in PANCREAS, with a Pearson correlation of 0.47.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC54→partner) and Y-score (partner→CCDC54) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
PANCREAS	RNF115 →	+0.510	+0.036	<.001	<.001	3	3
STOMACH	TUBA1A →	+2.666	+0.054	<.001	.002	3	3
SOFT_TISSUE	POLR3GL →	+0.686	+0.078	<.001	.001	3	3
SOFT_TISSUE	ARMCX3 →	+1.689	+0.151	<.001	<.001	3	3
STOMACH	JAZF1 →	+1.178	+0.056	.001	.001	2	3
STOMACH	COL3A1 →	+3.955	+0.092	<.001	.004	2	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 2,563 associations by consensus.

CCDC54 vs RNF115 — PANCREAS

Explore this scatter interactively →