CCDC40

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CCDC40 mutation is significantly associated with the total protein of many other genes, with 67 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CCDC40-associated genes across cancer lineages are Caspase-7-cleavedD198, NDRG1_pT346, and PRAS40_pT246. Each is linked with CCDC40 in more than 3 cancer types. Because this analysis shows association rather than direction, both CCDC40-to-partner and partner-to-CCDC40 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Caspase-7-cleavedD198 grouped by CCDC40-low versus CCDC40-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC40→partner) and Y-score (partner→CCDC40) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECCaspase-7-cleavedD198 →+0.622+1.807<.001<.00134
BLCANDRG1_pT346 →-0.708-3.169.023.01933
UCECPRAS40_pT246 →+0.122+1.013.017.03733
BLCAmTOR →+0.218+3.187.032.01032
UCECc-Met →-0.185-1.807.038<.00132
STADASNS →+0.446+3.321.032.01023
Each partner links to its Q-omics profile. Showing the 6 strongest of 67 associations by consensus.

Caspase-7-cleavedD198 by CCDC40 expression — UCEC

Box plot of Caspase-7-cleavedD198 in CCDC40-low vs CCDC40-high samples in UCEC.

Explore this box plot interactively →

Exploration