CCDC39-AS1

Across TCGA patient cohorts, CCDC39-AS1 RNA expression is significantly associated with the go_rna of many other GO terms, with 7,030 significant associations in total. STAD shows the largest number of these associations.

The most reproducible CCDC39-AS1-associated GO terms across cancer lineages are Intraciliary transport, Establishment of protein localization to membrane, and Transport along microtubule. Each is linked with CCDC39-AS1 in more than 24 cancer types. Because this analysis shows association rather than direction, both CCDC39-AS1-to-partner and partner-to-CCDC39-AS1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Intraciliary transport grouped by CCDC39-AS1-low versus CCDC39-AS1-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC39-AS1→partner) and Y-score (partner→CCDC39-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Intraciliary transport →	+0.050	+0.212	<.001	<.001	3	25
STAD	Establishment of protein localization to membrane →	+0.059	+0.191	<.001	<.001	3	24
STAD	Transport along microtubule →	+0.054	+0.243	<.001	<.001	3	24
THYM	Protein localization to ciliary membrane →	+0.050	+0.239	<.001	<.001	3	23
STAD	Protein stabilization →	+0.068	+0.212	<.001	<.001	3	23
STAD	Protein localization to cilium →	+0.041	+0.196	<.001	<.001	3	23

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,030 associations by consensus.

Intraciliary transport by CCDC39-AS1 expression — STAD

Explore this box plot interactively →