CCDC39-AS1

Across TCGA pan-cancer cohorts, CCDC39-AS1 RNA is linked to patient survival in 19 of 34 cancer types, making it the most broadly survival-associated CCDC39-AS1 data layer.

The strongest signal is observed in colon adenocarcinoma (COAD), where higher CCDC39-AS1 RNA is associated with worse overall survival. In most high-consensus cancer types, elevated CCDC39-AS1 expression acts as an unfavorable survival marker, although some lineages such as BRCA and ACC show a favorable association.

COAD, CESC, and BRCA are the cancer types where CCDC39-AS1 RNA most reproducibly stratifies survival.

RNA survival associations by lineage

Ranked by sampling consensus. AUC1 and AUC2 indicate survival in the high- and low-expression groups, respectively; the lower AUC marks the poorer-surviving group. p-values are from the log-rank test.

Lineage	Measure	Split	Stage	AUC1 high	AUC2 low	p	Sampling consensus
COAD	OS	Tertile	II,III,IV	0.294	0.599	<.001	102	view →
CESC	OS	Tertile	IV	0.091	0.593	<.001	48	view →
BRCA	DFS	Median	III,IV	0.599	0.430	<.001	42	view →
HNSC	OS	Tertile	All	0.198	0.395	.005	24	view →
ACC	DFS	Tertile	All	0.842	0.466	.024	24	view →
KIRP	DFS	Tertile	III,IV	1.000	0.336	.009	20	view →
UCEC	OS	Quartile	IV	1.000	0.641	.003	20	view →
BLCA	OS	Tertile	All	0.638	0.740	.021	18	view →
READ	DFS	Tertile	IV	0.514	0.636	.008	18	view →
LIHC	OS	Tertile	All	0.612	0.796	.017	18	view →
LUAD	DFS	Tertile	IV	0.292	0.652	.043	12	view →
KICH	DFS	Tertile	IV	0.317	0.923	.038	9	view →

Pink = unfavorable, green = favorable. Showing the 12 strongest of 19 lineages.

CCDC39-AS1–COAD (OS)

Open the COAD breakdown →