CCDC28B

Across TCGA patient cohorts, CCDC28B RNA expression is significantly associated with the protein abundance of many other proteins, with 11,733 significant associations in total. GBM shows the largest number of these associations.

The most reproducible CCDC28B-associated proteins across cancer lineages are ZMYM4, GATAD2B, and ZMYM4_S122. Each is linked with CCDC28B in more than 4 cancer types. Because this analysis shows association rather than direction, both CCDC28B-to-partner and partner-to-CCDC28B results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CCDC28B versus ZMYM4 in GBM, with a Pearson correlation of 0.54.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC28B→partner) and Y-score (partner→CCDC28B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	ZMYM4 →	+0.290	+0.403	<.001	<.001	3	5
HNSC	GATAD2B →	+0.361	+0.639	<.001	<.001	3	5
HNSC	ZMYM4_S122 →	+0.401	+0.648	<.001	<.001	2	5
HNSC	PARP1 →	+0.555	+0.579	<.001	<.001	3	4
LSCC	RPA1 →	+0.294	+0.468	.001	.001	3	4
LSCC	SDC1 →	-0.583	-0.577	.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 11,733 associations by consensus.

CCDC28B vs ZMYM4 — GBM

Explore this scatter interactively →