CCDC188

Across TCGA patient cohorts, CCDC188 RNA expression is significantly associated with the protein abundance of many other proteins, with 10,015 significant associations in total. CCRCC shows the largest number of these associations.

The most reproducible CCDC188-associated proteins across cancer lineages are SLC9A3R1, SSC5D, and TPPP3. Each is linked with CCDC188 in more than 3 cancer types. Because this analysis shows association rather than direction, both CCDC188-to-partner and partner-to-CCDC188 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CCDC188 versus SLC9A3R1 in BRCA, with a Pearson correlation of -0.35.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC188→partner) and Y-score (partner→CCDC188) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BRCA	SLC9A3R1 →	-0.752	-0.470	<.001	.001	3	4
BRCA	SSC5D →	+0.834	+0.444	<.001	<.001	3	4
UCEC	TPPP3 →	+1.382	+1.036	<.001	<.001	3	4
CCRCC	BGN →	+0.622	+0.417	<.001	<.001	3	4
BRCA	AKT3_S34 →	+0.838	+0.448	<.001	.002	3	4
CCRCC	GCN1 →	-0.215	-0.585	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 10,015 associations by consensus.

CCDC188 vs SLC9A3R1 — BRCA

Explore this scatter interactively →