CCDC18

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CCDC18 RNA expression is significantly associated with the protein abundance of many other proteins, with 16,589 significant associations in total. GBM shows the largest number of these associations.

The most reproducible CCDC18-associated proteins across cancer lineages are SETDB1_S1066, CDC20_T70, and MCM2. Each is linked with CCDC18 in more than 8 cancer types. Because this analysis shows association rather than direction, both CCDC18-to-partner and partner-to-CCDC18 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CCDC18 versus SETDB1_S1066 in UCEC, with a Pearson correlation of 0.45.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC18→partner) and Y-score (partner→CCDC18) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECSETDB1_S1066 →+0.966+0.724<.001<.00139
LUADCDC20_T70 →+0.945+0.418<.001<.00139
OVMCM2 →+0.605+0.825<.001<.00139
OVMCM3 →+0.722+0.798<.001<.00139
OVMCM4 →+0.643+0.687<.001<.00139
OVMCM5 →+0.597+0.848<.001<.00139
Each partner links to its Q-omics profile. Showing the 6 strongest of 16,589 associations by consensus.

CCDC18 vs SETDB1_S1066 — UCEC

Per-sample scatter of CCDC18 vs SETDB1_S1066 in UCEC (Pearson r = 0.45).

Explore this scatter interactively →

Exploration