CCDC173

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CCDC173 RNA expression is significantly associated with the go_rna of many other GO terms, with 2,642 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible CCDC173-associated GO terms across cancer lineages are Protein localization to cilium, Protein localization to ciliary transition zone, and Intraciliary anterograde transport. Each is linked with CCDC173 in more than 12 cancer types. Because this analysis shows association rather than direction, both CCDC173-to-partner and partner-to-CCDC173 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Protein localization to cilium grouped by CCDC173-low versus CCDC173-high in LIVER.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC173→partner) and Y-score (partner→CCDC173) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LIVERProtein localization to cilium →+0.068+0.447.001<.001313
LUNG_SCLCProtein localization to ciliary transition zone →+0.083+0.667<.001.001211
LUNG_SCLCIntraciliary anterograde transport →+0.105+0.595<.001.003310
LARGE_INTESTINEPositive regulation of organelle assembly →+0.054+0.216<.001<.001310
LUNG_SCLCTransport along microtubule →+0.050+0.608.006.00439
BREASTU2-type prespliceosome assembly →+0.082+0.308.006.005111
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,642 associations by consensus.

Protein localization to cilium by CCDC173 expression — LIVER

Box plot of Protein localization to cilium in CCDC173-low vs CCDC173-high samples in LIVER.

Explore this box plot interactively →

Exploration