CCDC173

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CCDC173 mutation is significantly associated with the RNA expression of many other genes, with 10 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible CCDC173-associated genes across cancer lineages are MCHR2, R3HDML, and HHLA1. Each is linked with CCDC173 in more than 1 cancer types. Because this analysis shows association rather than direction, both CCDC173-to-partner and partner-to-CCDC173 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MCHR2 grouped by CCDC173-low versus CCDC173-high in BLOOD_Leukemia.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC173→partner) and Y-score (partner→CCDC173) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaMCHR2 →+0.034+4.539<.001.00732
BLOOD_LeukemiaR3HDML →+0.020+5.569<.001.00131
BLOOD_LeukemiaHHLA1 →+0.011+4.551<.001.00431
BLOOD_LeukemiaABCG8 →+0.021+4.152<.001.00931
BLOOD_LeukemiaOR56A1 →+0.069+4.276<.001.00731
BLOOD_LeukemiaKRT40 →+0.017+4.152.002.00931
Each partner links to its Q-omics profile. Showing the 6 strongest of 10 associations by consensus.

MCHR2 by CCDC173 expression — BLOOD_Leukemia

Box plot of MCHR2 in CCDC173-low vs CCDC173-high samples in BLOOD_Leukemia.

Explore this box plot interactively →

Exploration