CCDC144B

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CCDC144B mutation is significantly associated with the RNA expression of many other genes, with 1,500 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CCDC144B-associated genes across cancer lineages are MIR1179, OR6U2P, and RNU6-1213P. Each is linked with CCDC144B in more than 2 cancer types. Because this analysis shows association rather than direction, both CCDC144B-to-partner and partner-to-CCDC144B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MIR1179 grouped by CCDC144B-low versus CCDC144B-high in COAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC144B→partner) and Y-score (partner→CCDC144B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADMIR1179 →+1.171+7.741<.001.00933
LIHCOR6U2P →+0.233+5.108<.001.00832
UCECRNU6-1213P →+0.161+3.233<.001<.00132
BRCARNA5SP23 →+0.220+7.731<.001.00932
CESCADGRL3-AS1 →+0.058+4.816<.001.00332
BLCARBBP4P6 →+0.250+6.618<.001.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,500 associations by consensus.

MIR1179 by CCDC144B expression — COAD

Box plot of MIR1179 in CCDC144B-low vs CCDC144B-high samples in COAD.

Explore this box plot interactively →

Exploration