CCDC124

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CCDC124 RNA expression is significantly associated with the protein abundance of many other proteins, with 13,335 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible CCDC124-associated proteins across cancer lineages are DDX39A, ARMC6, and QTRT1. Each is linked with CCDC124 in more than 4 cancer types. Because this analysis shows association rather than direction, both CCDC124-to-partner and partner-to-CCDC124 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CCDC124 versus DDX39A in OV, with a Pearson correlation of 0.34.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC124→partner) and Y-score (partner→CCDC124) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVDDX39A →+0.371+0.513.001.00335
LSCCARMC6 →+0.293+0.454<.001<.00134
GBMQTRT1 →+0.353+0.299<.001<.00134
GBMSGTA →+0.290+0.350<.001<.00134
UCECCHAF1B_S410 →+0.709+0.931.001.00934
LSCCCOLGALT1 →+0.461+0.583<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 13,335 associations by consensus.

CCDC124 vs DDX39A — OV

Per-sample scatter of CCDC124 vs DDX39A in OV (Pearson r = 0.34).

Explore this scatter interactively →

Exploration