CCDC105

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CCDC105 mutation is significantly associated with the RNA expression of many other genes, with 9 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible CCDC105-associated genes across cancer lineages are LECT2, KRTAP4-11, and PRR23C. Each is linked with CCDC105 in more than 1 cancer types. Because this analysis shows association rather than direction, both CCDC105-to-partner and partner-to-CCDC105 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, LECT2 grouped by CCDC105-low versus CCDC105-high in BLOOD_Leukemia.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC105→partner) and Y-score (partner→CCDC105) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaLECT2 →+0.186+4.922<.001.00931
BLOOD_LeukemiaKRTAP4-11 →+0.022+5.539<.001.00331
BLOOD_LeukemiaPRR23C →+0.006+6.569<.001<.00131
LARGE_INTESTINEMSGN1 →+0.100+3.930<.001.00331
LARGE_INTESTINEOR2B2 →+0.030+4.347.003.00131
LARGE_INTESTINEC14orf180 →+0.204+4.155<.001.00331
Each partner links to its Q-omics profile. Showing the 6 strongest of 9 associations by consensus.

LECT2 by CCDC105 expression — BLOOD_Leukemia

Box plot of LECT2 in CCDC105-low vs CCDC105-high samples in BLOOD_Leukemia.

Explore this box plot interactively →

Exploration