CCDC102B

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CCDC102B RNA expression is significantly associated with the protein abundance of many other proteins, with 15,195 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible CCDC102B-associated proteins across cancer lineages are NID2, LAMB1, and MMP2. Each is linked with CCDC102B in more than 9 cancer types. Because this analysis shows association rather than direction, both CCDC102B-to-partner and partner-to-CCDC102B results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CCDC102B versus NID2 in BRCA, with a Pearson correlation of 0.53.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC102B→partner) and Y-score (partner→CCDC102B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCANID2 →+0.534+0.534<.001<.001310
BRCALAMB1 →+0.502+0.607<.001<.00139
BRCAMMP2 →+0.823+0.515<.001<.00138
COADFMNL3 →+0.439+0.508<.001.00138
GBMRCN3 →+0.852+0.821<.001<.00138
HNSCCOL3A1 →+0.800+0.524<.001.00238
Each partner links to its Q-omics profile. Showing the 6 strongest of 15,195 associations by consensus.

CCDC102B vs NID2 — BRCA

Per-sample scatter of CCDC102B vs NID2 in BRCA (Pearson r = 0.53).

Explore this scatter interactively →

Exploration