CBX3

Across TCGA patient cohorts, CBX3 protein abundance is significantly associated with the RNA expression of many other genes, with 14,741 significant associations in total. GBM shows the largest number of these associations.

The most reproducible CBX3-associated genes across cancer lineages are C19orf48, TRAIP, and PRC1-AS1. Each is linked with CBX3 in more than 7 cancer types. Because this analysis shows association rather than direction, both CBX3-to-partner and partner-to-CBX3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CBX3 versus C19orf48 in UCEC, with a Pearson correlation of 0.33.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CBX3→partner) and Y-score (partner→CBX3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	C19orf48 →	+1.061	+0.195	.002	.002	3	8
UCEC	TRAIP →	+1.185	+0.310	<.001	<.001	3	8
LSCC	PRC1-AS1 →	+0.515	+0.193	<.001	<.001	3	8
GBM	HELLS →	+0.764	+0.333	<.001	<.001	3	7
UCEC	TRIM28 →	+1.089	+0.299	<.001	<.001	3	7
UCEC	KIF15 →	+1.186	+0.196	<.001	<.001	3	7

Each partner links to its Q-omics profile. Showing the 6 strongest of 14,741 associations by consensus.

CBX3 vs C19orf48 — UCEC

Explore this scatter interactively →