CBLN3

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CBLN3 mutation is significantly associated with the RNA expression of many other genes, with 2 significant associations in total. OESOPHAGUS shows the largest number of these associations.

The most reproducible CBLN3-associated genes across cancer lineages are SLC5A8 and KRTAP12-3. Each is linked with CBLN3 in more than 1 cancer types. Because this analysis shows association rather than direction, both CBLN3-to-partner and partner-to-CBLN3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, SLC5A8 grouped by CBLN3-low versus CBLN3-high in OESOPHAGUS.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CBLN3→partner) and Y-score (partner→CBLN3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OESOPHAGUSSLC5A8 →+0.070+4.906<.001.00631
BLOOD_LeukemiaKRTAP12-3 →+0.124+5.539<.001.00331
Each partner links to its Q-omics profile. Showing the 2 strongest of 2 associations by consensus.

SLC5A8 by CBLN3 expression — OESOPHAGUS

Box plot of SLC5A8 in CBLN3-low vs CBLN3-high samples in OESOPHAGUS.

Explore this box plot interactively →

Exploration