CASP5

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CASP5 mutation is significantly associated with the RNA expression of many other genes, with 4,293 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CASP5-associated genes across cancer lineages are MIR6853, SEPTIN7P4, and TAF9. Each is linked with CASP5 in more than 1 cancer types. Because this analysis shows association rather than direction, both CASP5-to-partner and partner-to-CASP5 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MIR6853 grouped by CASP5-low versus CASP5-high in BRCA.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CASP5→partner) and Y-score (partner→CASP5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAMIR6853 →+0.242+8.057<.001.00532
COADSEPTIN7P4 →+0.124+4.917.001<.00132
UCECTAF9 →+0.832+3.058<.001<.00132
UCECSLC25A4 →+0.558+1.885<.001.00132
UCECBAG3 →+0.546+2.386<.001.00232
UCECGBP5 →+1.032+1.885<.001.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,293 associations by consensus.

MIR6853 by CASP5 expression — BRCA

Box plot of MIR6853 in CASP5-low vs CASP5-high samples in BRCA.

Explore this box plot interactively →

Exploration