CASD1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CASD1 mutation is significantly associated with the RNA expression of many other genes, with 5,341 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CASD1-associated genes across cancer lineages are DNAJC8P1, FAM219B, and C3orf38. Each is linked with CASD1 in more than 2 cancer types. Because this analysis shows association rather than direction, both CASD1-to-partner and partner-to-CASD1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, DNAJC8P1 grouped by CASD1-low versus CASD1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CASD1→partner) and Y-score (partner→CASD1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECDNAJC8P1 →+0.285+1.895<.001.00133
UCECFAM219B →+0.534+2.917<.001<.00132
UCECC3orf38 →+0.459+3.595<.001.00132
UCECARF4P1 →+0.346+2.254.004.00532
UCECRNA5SP412 →+0.509+1.645<.001.00832
UCECSENP3-EIF4A1 →+0.133+3.006<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,341 associations by consensus.

DNAJC8P1 by CASD1 expression — UCEC

Box plot of DNAJC8P1 in CASD1-low vs CASD1-high samples in UCEC.

Explore this box plot interactively →

Exploration