CAPS2-AS1

Across TCGA patient cohorts, CAPS2-AS1 RNA expression is significantly associated with the RNA expression of many other genes, with 9,029 significant associations in total. THYM shows the largest number of these associations.

The most reproducible CAPS2-AS1-associated genes across cancer lineages are CAPS2, CCDC39, and RBM12B-AS1. Each is linked with CAPS2-AS1 in more than 23 cancer types. Because this analysis shows association rather than direction, both CAPS2-AS1-to-partner and partner-to-CAPS2-AS1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CAPS2-AS1 versus CAPS2 in KICH, with a Pearson correlation of 0.55.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CAPS2-AS1→partner) and Y-score (partner→CAPS2-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
KICH	CAPS2 →	+0.901	+0.046	<.001	<.001	3	24
THYM	CCDC39 →	+0.789	+0.015	<.001	<.001	3	24
THYM	RBM12B-AS1 →	+0.744	+0.020	<.001	<.001	2	23
LAML	POC1B-AS1 →	+0.583	+0.116	<.001	.002	3	22
THYM	TSSK4 →	+0.946	+0.016	<.001	<.001	3	22
LAML	GLIPR1L1 →	+0.663	+0.098	<.001	<.001	3	22

Each partner links to its Q-omics profile. Showing the 6 strongest of 9,029 associations by consensus.

CAPS2-AS1 vs CAPS2 — KICH

Explore this scatter interactively →