CANX

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CANX RNA expression is significantly associated with the protein abundance of many other proteins, with 10,762 significant associations in total. CCRCC shows the largest number of these associations.

The most reproducible CANX-associated proteins across cancer lineages are NPM1, CANX_S583, and GEMIN5. Each is linked with CANX in more than 5 cancer types. Because this analysis shows association rather than direction, both CANX-to-partner and partner-to-CANX results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CANX versus NPM1 in OV, with a Pearson correlation of 0.43.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CANX→partner) and Y-score (partner→CANX) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVNPM1 →+0.353+0.482<.001<.00136
BRCACANX_S583 →+0.611+0.536<.001<.00136
LUADGEMIN5 →+0.229+0.519<.001<.00136
OVTTC1 →+0.296+0.650<.001<.00135
CCRCCYTHDC2 →+0.289+0.450<.001<.00135
OVFAF2 →+0.310+0.754<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 10,762 associations by consensus.

CANX vs NPM1 — OV

Per-sample scatter of CANX vs NPM1 in OV (Pearson r = 0.43).

Explore this scatter interactively →

Exploration