CAMTA1-DT

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CAMTA1-DT RNA expression is significantly associated with the protein abundance of many other proteins, with 11,548 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible CAMTA1-DT-associated proteins across cancer lineages are MDC1_S793, SMC1A, and SPEN_T1140. Each is linked with CAMTA1-DT in more than 4 cancer types. Because this analysis shows association rather than direction, both CAMTA1-DT-to-partner and partner-to-CAMTA1-DT results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CAMTA1-DT versus MDC1_S793 in LSCC, with a Pearson correlation of 0.30.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CAMTA1-DT→partner) and Y-score (partner→CAMTA1-DT) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCMDC1_S793 →+0.513+0.526.004.00435
LSCCSMC1A →+0.398+0.777<.001<.00135
BRCASPEN_T1140 →+0.469+0.600.006.00235
LSCCWRNIP1 →+0.518+0.669<.001<.00134
LSCCZFR →+0.310+0.789<.001<.00134
BRCARFC1 →+0.274+0.604<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 11,548 associations by consensus.

CAMTA1-DT vs MDC1_S793 — LSCC

Per-sample scatter of CAMTA1-DT vs MDC1_S793 in LSCC (Pearson r = 0.30).

Explore this scatter interactively →

Exploration