CALN1

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CALN1 RNA expression is significantly associated with the protein abundance of many other proteins, with 17,488 significant associations in total. GBM shows the largest number of these associations.

The most reproducible CALN1-associated proteins across cancer lineages are CADM1, UPP1, and PPP1R18_S224. Each is linked with CALN1 in more than 3 cancer types. Because this analysis shows association rather than direction, both CALN1-to-partner and partner-to-CALN1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CALN1 versus CADM1 in HNSC, with a Pearson correlation of 0.29.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CALN1→partner) and Y-score (partner→CALN1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCCADM1 →+0.649+0.507<.001.00534
GBMUPP1 →-0.853-1.085<.001.00133
UCECPPP1R18_S224 →-0.490-1.332<.001<.00133
HNSCDDAH1 →+0.440+0.519.001.00433
GBMERO1A →-0.540-0.943<.001<.00133
GBMJUNB →-0.536-1.525<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 17,488 associations by consensus.

CALN1 vs CADM1 — HNSC

Per-sample scatter of CALN1 vs CADM1 in HNSC (Pearson r = 0.29).

Explore this scatter interactively →

Exploration