Across TCGA patient cohorts, CALML3-AS1 RNA expression is significantly associated with the RNA expression of many other genes, with 14,799 significant associations in total. THYM shows the largest number of these associations.

The most reproducible CALML3-AS1-associated genes across cancer lineages are NET1, CALML3, and DSP. Each is linked with CALML3-AS1 in more than 24 cancer types. Because this analysis shows association rather than direction, both CALML3-AS1-to-partner and partner-to-CALML3-AS1 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CALML3-AS1→partner) and Y-score (partner→CALML3-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
THYM	NET1 →	+1.449	+1.754	<.001	<.001	3	25
ESCA	CALML3 →	+6.319	+2.570	<.001	<.001	3	25
ESCA	DSP →	+2.298	+2.310	<.001	<.001	3	22
ESCA	PPL →	+2.179	+2.001	<.001	<.001	3	20
TGCT	DAAM1 →	+0.934	+0.117	<.001	.002	3	20
ESCA	LTB4R2 →	+1.609	+2.314	<.001	<.001	3	19

Each partner links to its Q-omics profile. Showing the 6 strongest of 14,799 associations by consensus.

Exploration

CALML3-AS1 survival (RNA) · tumor vs normal (RNA) · all CALML3-AS1 data types