CALM3

Across TCGA patient cohorts, CALM3 RNA expression is significantly associated with the protein abundance of many other proteins, with 15,623 significant associations in total. GBM shows the largest number of these associations.

The most reproducible CALM3-associated proteins across cancer lineages are STRN4, PPP5C, and ARHGAP35. Each is linked with CALM3 in more than 5 cancer types. Because this analysis shows association rather than direction, both CALM3-to-partner and partner-to-CALM3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CALM3 versus STRN4 in OV, with a Pearson correlation of 0.51.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CALM3→partner) and Y-score (partner→CALM3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
OV	STRN4 →	+0.211	+0.516	<.001	<.001	3	6
BRCA	PPP5C →	+0.274	+0.655	<.001	<.001	3	5
BRCA	ARHGAP35 →	+0.357	+0.466	.006	.008	3	4
GBM	PKP4 →	+0.365	+0.521	<.001	<.001	3	4
OV	TUFM →	-0.412	-0.525	.001	<.001	3	4
OV	GCDH →	-0.467	-0.547	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 15,623 associations by consensus.

CALM3 vs STRN4 — OV

Explore this scatter interactively →