CALM2

mutation — cross-omics
Cross-omicsMUTATION → IMMUNEPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CALM2 mutation is significantly associated with the immune_cell of many other genes, with 1 significant associations in total. ESCA shows the largest number of these associations.

The most reproducible CALM2-associated genes across cancer lineages are Fibroblasts. Each is linked with CALM2 in more than 1 cancer types. Because this analysis shows association rather than direction, both CALM2-to-partner and partner-to-CALM2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Fibroblasts grouped by CALM2-low versus CALM2-high in ESCA.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CALM2→partner) and Y-score (partner→CALM2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
ESCAFibroblasts →+0.054+3.726.045.04531
Each partner links to its Q-omics profile. Showing the 1 strongest of 1 associations by consensus.

Fibroblasts by CALM2 expression — ESCA

Box plot of Fibroblasts in CALM2-low vs CALM2-high samples in ESCA.

Explore this box plot interactively →

Exploration