Across TCGA patient cohorts, CALM1 mutation is significantly associated with the RNA expression of many other genes, with 2,019 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CALM1-associated genes across cancer lineages are AK4P5, TRIM49B, and GYG2P1. Each is linked with CALM1 in more than 1 cancer types. Because this analysis shows association rather than direction, both CALM1-to-partner and partner-to-CALM1 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CALM1→partner) and Y-score (partner→CALM1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	AK4P5 →	+0.096	+1.870	<.001	.009	3	2
CESC	TRIM49B →	+0.562	+4.760	.006	.003	3	1
CESC	GYG2P1 →	+0.033	+4.601	<.001	.004	3	1
CESC	RNU6-535P →	+0.280	+5.569	<.001	.002	3	1
CESC	SLC25A1P3 →	+0.095	+5.196	<.001	.001	3	1
CESC	RNA5SP239 →	+0.361	+6.397	<.001	<.001	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 2,019 associations by consensus.

Exploration

CALM1 survival (RNA) · tumor vs normal (RNA) · all CALM1 data types