CAD

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CAD RNA expression is significantly associated with the protein abundance of many other proteins, with 20,009 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible CAD-associated proteins across cancer lineages are WDR75, CPSF3, and NOL10. Each is linked with CAD in more than 8 cancer types. Because this analysis shows association rather than direction, both CAD-to-partner and partner-to-CAD results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CAD versus WDR75 in LSCC, with a Pearson correlation of 0.70.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CAD→partner) and Y-score (partner→CAD) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCWDR75 →+0.401+0.897<.001<.00139
BRCACPSF3 →+0.240+0.564<.001<.00138
LSCCNOL10 →+0.437+0.827<.001<.00138
LSCCPDCD11 →+0.406+0.718<.001<.00138
GBMSF3B3 →+0.216+0.486<.001<.00138
LSCCUTP4 →+0.368+0.846<.001<.00138
Each partner links to its Q-omics profile. Showing the 6 strongest of 20,009 associations by consensus.

CAD vs WDR75 — LSCC

Per-sample scatter of CAD vs WDR75 in LSCC (Pearson r = 0.70).

Explore this scatter interactively →

Exploration