CAD

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CAD mutation is significantly associated with the RNA expression of many other genes, with 668 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible CAD-associated genes across cancer lineages are ULBP1, OR2A14, and NOB1. Each is linked with CAD in more than 2 cancer types. Because this analysis shows association rather than direction, both CAD-to-partner and partner-to-CAD results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ULBP1 grouped by CAD-low versus CAD-high in SKIN.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CAD→partner) and Y-score (partner→CAD) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKINULBP1 →+1.047+3.355.005.00733
BLOOD_MyelomaOR2A14 →+0.033+4.807<.001.00632
BLOOD_LeukemiaNOB1 →+0.420+3.489.002.00132
BLOOD_LeukemiaLRRC38 →+1.327+2.531<.001.00432
BLOOD_LeukemiaMTHFD2 →+0.831+3.489.001.00132
BREASTIL10 →+0.042+4.362.005.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 668 associations by consensus.

ULBP1 by CAD expression — SKIN

Box plot of ULBP1 in CAD-low vs CAD-high samples in SKIN.

Explore this box plot interactively →

Exploration