CACNG4

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CACNG4 mutation is significantly associated with the RNA expression of many other genes, with 6 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible CACNG4-associated genes across cancer lineages are GNGT1, IFNL2, and ANGPTL5. Each is linked with CACNG4 in more than 1 cancer types. Because this analysis shows association rather than direction, both CACNG4-to-partner and partner-to-CACNG4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, GNGT1 grouped by CACNG4-low versus CACNG4-high in BLOOD_Leukemia.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CACNG4→partner) and Y-score (partner→CACNG4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaGNGT1 →+0.050+4.551.002.00431
BLOOD_LeukemiaIFNL2 →+0.034+5.060.009.00131
BLOOD_LeukemiaANGPTL5 →+0.022+4.276.007.00731
BLOOD_LeukemiaKRTAP12-3 →+0.092+4.539<.001.00731
LARGE_INTESTINETIFAB →+0.006+4.977<.001.00731
BLOOD_LeukemiaIP6K3 →+0.028+4.234.001.00711
Each partner links to its Q-omics profile. Showing the 6 strongest of 6 associations by consensus.

GNGT1 by CACNG4 expression — BLOOD_Leukemia

Box plot of GNGT1 in CACNG4-low vs CACNG4-high samples in BLOOD_Leukemia.

Explore this box plot interactively →

Exploration