CACNG2

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CACNG2 protein abundance is significantly associated with the RNA expression of many other genes, with 2,549 significant associations in total. GBM shows the largest number of these associations.

The most reproducible CACNG2-associated genes across cancer lineages are SNRPD3, PRODH, and GRK3. Each is linked with CACNG2 in more than 1 cancer types. Because this analysis shows association rather than direction, both CACNG2-to-partner and partner-to-CACNG2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CACNG2 versus SNRPD3 in GBM, with a Pearson correlation of 0.33.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CACNG2→partner) and Y-score (partner→CACNG2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMSNRPD3 →+0.341+0.577.005.00131
GBMPRODH →+0.764+0.572.002<.00131
GBMGRK3 →+0.396+0.584.004<.00131
GBMSOX10 →+1.365+0.533.001.00131
GBMSLC16A8 →+0.540+0.489.001.00431
GBMSEPTIN3 →+0.908+0.731<.001<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,549 associations by consensus.

CACNG2 vs SNRPD3 — GBM

Per-sample scatter of CACNG2 vs SNRPD3 in GBM (Pearson r = 0.33).

Explore this scatter interactively →

Exploration