CACNB4

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CACNB4 RNA expression is significantly associated with the go_rna of many other GO terms, with 1,995 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible CACNB4-associated GO terms across cancer lineages are Peptidyl-lysine modification, ATP biosynthetic process, and Establishment of protein localization to organelle. Each is linked with CACNB4 in more than 7 cancer types. Because this analysis shows association rather than direction, both CACNB4-to-partner and partner-to-CACNB4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Peptidyl-lysine modification grouped by CACNB4-low versus CACNB4-high in SOFT_TISSUE.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (CACNB4→partner) and Y-score (partner→CACNB4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SOFT_TISSUEPeptidyl-lysine modification →+0.034+0.491<.001.00238
SKINATP biosynthetic process →+0.082+0.510<.001<.00138
UPPER_AERODIGESTIVE_TRACTEstablishment of protein localization to organelle →+0.051+0.171.003.00537
KIDNEYATP metabolic process →+0.068+0.678.001.00537
SKINPurine nucleoside triphosphate biosynthetic process →+0.085+0.494<.001<.00137
SKINPurine ribonucleoside triphosphate biosynthetic process →+0.085+0.494<.001<.00137
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,995 associations by consensus.

Peptidyl-lysine modification by CACNB4 expression — SOFT_TISSUE

Box plot of Peptidyl-lysine modification in CACNB4-low vs CACNB4-high samples in SOFT_TISSUE.

Explore this box plot interactively →

Exploration