CACNB3

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CACNB3 mutation is significantly associated with the RNA expression of many other genes, with 2,206 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CACNB3-associated genes across cancer lineages are PSAT1P4, ADRA2C, and RPL23AP82. Each is linked with CACNB3 in more than 2 cancer types. Because this analysis shows association rather than direction, both CACNB3-to-partner and partner-to-CACNB3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, PSAT1P4 grouped by CACNB3-low versus CACNB3-high in COAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CACNB3→partner) and Y-score (partner→CACNB3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADPSAT1P4 →+0.178+2.463.001.00933
UCECADRA2C →-1.072-2.906<.001.00132
UCECRPL23AP82 →+0.427+2.273<.001<.00132
UCECSNAI3 →+0.326+2.743.009.00232
UCECMAPK12 →+0.723+2.343<.001.00332
UCECIGLV1-36 →+1.463+2.617<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,206 associations by consensus.

PSAT1P4 by CACNB3 expression — COAD

Box plot of PSAT1P4 in CACNB3-low vs CACNB3-high samples in COAD.

Explore this box plot interactively →

Exploration