CACNA1C

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CACNA1C RNA expression is significantly associated with the go_rna of many other GO terms, with 4,024 significant associations in total. BONE shows the largest number of these associations.

The most reproducible CACNA1C-associated GO terms across cancer lineages are Cellular response to UV, Negative regulation of ossification, and Regulation of endosome organization. Each is linked with CACNA1C in more than 7 cancer types. Because this analysis shows association rather than direction, both CACNA1C-to-partner and partner-to-CACNA1C results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Cellular response to UV grouped by CACNA1C-low versus CACNA1C-high in SKIN.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (CACNA1C→partner) and Y-score (partner→CACNA1C) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKINCellular response to UV →+0.043+0.734.002.00538
BONENegative regulation of ossification →+0.071+1.456.004.00136
BONERegulation of endosome organization →+0.178+1.563.002.00336
PANCREASCellular response to unfolded protein →+0.097+0.363<.001.00236
PANCREASResponse to topologically incorrect protein →+0.081+0.359.001.00336
CNSProtein localization to vacuole →+0.054+1.198.001.00236
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,024 associations by consensus.

Cellular response to UV by CACNA1C expression — SKIN

Box plot of Cellular response to UV in CACNA1C-low vs CACNA1C-high samples in SKIN.

Explore this box plot interactively →

Exploration