CACNA1C-AS1

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, CACNA1C-AS1 RNA differs between tumor and matched normal tissue in 10 of 18 cancer types tested, making tumor–normal expression one of CACNA1C-AS1’s most consistent transcriptional readouts.

The strongest signal is observed in kidney renal clear cell carcinoma (KIRC), where CACNA1C-AS1 RNA is more highly expressed in tumor relative to normal tissue. In most cancer types CACNA1C-AS1 is over-expressed in tumor, although a few such as KICH and LUSC show the opposite, repressed pattern.

KIRC, KICH, and HNSC are the cancer types where CACNA1C-AS1 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in CACNA1C-AS1 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
KIRCMaleAll+0.080<.0015view →
KICHMaleAll−0.095.0034view →
HNSCAllAll+0.060.0224view →
COADFemaleIV+0.464.0123view →
LUSCMaleIII,IV−0.297.0163view →
THCAFemaleII,III,IV−0.123.0183view →
BLCAAllIV−0.300.0092view →
LUADMaleIII,IV−0.175.0052view →
PRADAllAll+0.084.0162view →
STADAllIV−0.263.0481view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 10 strongest of 10 lineages.

CACNA1C-AS1–KIRC

Tumor-vs-normal expression box plot for CACNA1C-AS1 RNA in KIRC.

Open the KIRC breakdown →

Exploration