CACNA1B

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CACNA1B RNA expression is significantly associated with the go_rna of many other GO terms, with 2,841 significant associations in total. BONE shows the largest number of these associations.

The most reproducible CACNA1B-associated GO terms across cancer lineages are Regulation of nucleobase-containing compound transport, Positive regulation of synaptic vesicle exocytosis, and 5S class rRNA transcription by RNA polymerase III. Each is linked with CACNA1B in more than 8 cancer types. Because this analysis shows association rather than direction, both CACNA1B-to-partner and partner-to-CACNA1B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of nucleobase-containing compound transport grouped by CACNA1B-low versus CACNA1B-high in OVARY.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (CACNA1B→partner) and Y-score (partner→CACNA1B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVARYRegulation of nucleobase-containing compound transport →+0.119+0.692<.001.00239
OESOPHAGUSPositive regulation of synaptic vesicle exocytosis →-1.185-0.688<.001<.00139
BONE5S class rRNA transcription by RNA polymerase III →+0.133+1.133<.001<.00139
OVARYPositive regulation of calcium ion-dependent exocytosis of neurotransmitter →-1.054-0.698<.001<.00138
BONEtRNA transcription by RNA polymerase III →+0.119+1.106<.001<.00138
OESOPHAGUSPositive regulation of translation →+0.091+0.792.001.00438
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,841 associations by consensus.

Regulation of nucleobase-containing compound transport by CACNA1B expression — OVARY

Box plot of Regulation of nucleobase-containing compound transport in CACNA1B-low vs CACNA1B-high samples in OVARY.

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Exploration