CABP2

RNA expression — cross-omics
Cross-omicsRNA → MUTATIONCell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CABP2 RNA expression is significantly associated with the mutation status of many other genes, with 70 significant associations in total. LUNG_SCLC shows the largest number of these associations.

The most reproducible CABP2-associated genes across cancer lineages are SYT14, CBLIF, and YME1L1. Each is linked with CABP2 in more than 1 cancer types. Because this analysis shows association rather than direction, both CABP2-to-partner and partner-to-CABP2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, SYT14 grouped by CABP2-low versus CABP2-high in LUNG_SCLC.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CABP2→partner) and Y-score (partner→CABP2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_SCLCSYT14 →+5.029+0.040.006.00632
SOFT_TISSUECBLIF →+5.369+0.092.004<.00131
SOFT_TISSUEYME1L1 →+4.369+0.058.008<.00131
SOFT_TISSUEITGA1 →+4.369+0.069.008<.00131
SOFT_TISSUEKCNH2 →+4.369+0.069.008<.00131
LUNG_SCLCVPS9D1 →+5.029+0.075.006<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 70 associations by consensus.

SYT14 by CABP2 expression — LUNG_SCLC

Box plot of SYT14 in CABP2-low vs CABP2-high samples in LUNG_SCLC.

Explore this box plot interactively →

Exploration