CAB39

Across TCGA patient cohorts, CAB39 RNA expression is significantly associated with the protein abundance of many other proteins, with 13,546 significant associations in total. PDAC shows the largest number of these associations.

The most reproducible CAB39-associated proteins across cancer lineages are MRPL22, TRIP12, and PXN. Each is linked with CAB39 in more than 4 cancer types. Because this analysis shows association rather than direction, both CAB39-to-partner and partner-to-CAB39 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CAB39 versus MRPL22 in BRCA, with a Pearson correlation of -0.32.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CAB39→partner) and Y-score (partner→CAB39) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BRCA	MRPL22 →	-0.339	-0.495	<.001	<.001	3	5
OV	TRIP12 →	+0.350	+0.380	.001	.009	3	4
HNSC	PXN →	+0.335	+0.393	<.001	.009	3	4
BRCA	SSH3 →	+0.482	+0.418	.002	.003	3	4
BRCA	MRPS35 →	-0.348	-0.602	<.001	<.001	3	4
LSCC	MRPS9 →	-0.374	-0.401	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 13,546 associations by consensus.

CAB39 vs MRPL22 — BRCA

Explore this scatter interactively →