C9orf139

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, C9orf139 RNA expression is significantly associated with the protein abundance of many other proteins, with 14,322 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible C9orf139-associated proteins across cancer lineages are ARHGAP15, ARHGAP45, and LCP2. Each is linked with C9orf139 in more than 8 cancer types. Because this analysis shows association rather than direction, both C9orf139-to-partner and partner-to-C9orf139 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, C9orf139 versus ARHGAP15 in UCEC, with a Pearson correlation of 0.52.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (C9orf139→partner) and Y-score (partner→C9orf139) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECARHGAP15 →+0.783+0.594<.001<.00139
UCECARHGAP45 →+0.577+0.453<.001<.00139
UCECLCP2 →+0.598+0.463<.001<.00139
LSCCLPXN →+0.552+0.325<.001<.00139
UCECCORO1A →+0.752+0.515<.001<.00139
UCECDOCK10 →+0.610+0.442<.001<.00139
Each partner links to its Q-omics profile. Showing the 6 strongest of 14,322 associations by consensus.

C9orf139 vs ARHGAP15 — UCEC

Per-sample scatter of C9orf139 vs ARHGAP15 in UCEC (Pearson r = 0.52).

Explore this scatter interactively →

Exploration