C9

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, C9 RNA expression is significantly associated with the go_rna of many other GO terms, with 965 significant associations in total. BONE shows the largest number of these associations.

The most reproducible C9-associated GO terms across cancer lineages are Regulation of smooth muscle cell proliferation, Positive regulation of aldosterone biosynthetic process, and Response to carbohydrate. Each is linked with C9 in more than 5 cancer types. Because this analysis shows association rather than direction, both C9-to-partner and partner-to-C9 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of smooth muscle cell proliferation grouped by C9-low versus C9-high in PANCREAS.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (C9→partner) and Y-score (partner→C9) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PANCREASRegulation of smooth muscle cell proliferation →+0.078+0.094<.001.00136
SOFT_TISSUEPositive regulation of aldosterone biosynthetic process →+1.355+0.068<.001<.00135
LUNG_NSCLC_LUSCResponse to carbohydrate →+0.102+0.062<.001.00635
PANCREASRegulation of epithelial to mesenchymal transition →+0.063+0.087<.001.00625
OVARYQuinone biosynthetic process →-0.065-0.038.005.00634
OVARYRegulation of aerobic respiration →+0.065+0.056.001.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 965 associations by consensus.

Regulation of smooth muscle cell proliferation by C9 expression — PANCREAS

Box plot of Regulation of smooth muscle cell proliferation in C9-low vs C9-high samples in PANCREAS.

Explore this box plot interactively →

Exploration