C4orf17

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, C4orf17 protein abundance is significantly associated with the RNA expression of many other genes, with 46 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible C4orf17-associated genes across cancer lineages are IFNA8, KCNJ5, and SOX9. Each is linked with C4orf17 in more than 1 cancer types. Because this analysis shows association rather than direction, both C4orf17-to-partner and partner-to-C4orf17 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, C4orf17 versus IFNA8 in HNSC, with a Pearson correlation of 0.30.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (C4orf17→partner) and Y-score (partner→C4orf17) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCIFNA8 →+0.105+0.460.005.00631
HNSCKCNJ5 →+0.818+0.584.001.00231
HNSCSOX9 →+1.337+0.394.004.00931
HNSCTPRKB →+0.343+0.439.006.00331
HNSCHKDC1 →-1.337-0.544.003.00831
HNSCZNF22 →+0.606+0.608.007.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 46 associations by consensus.

C4orf17 vs IFNA8 — HNSC

Per-sample scatter of C4orf17 vs IFNA8 in HNSC (Pearson r = 0.30).

Explore this scatter interactively →

Exploration