C4B

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, C4B mutation is significantly associated with the RNA expression of many other genes, with 248 significant associations in total. SKCM shows the largest number of these associations.

The most reproducible C4B-associated genes across cancer lineages are SSX9P, MIR3132, and FAM204DP. Each is linked with C4B in more than 1 cancer types. Because this analysis shows association rather than direction, both C4B-to-partner and partner-to-C4B results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (C4B→partner) and Y-score (partner→C4B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLCASSX9P →+1.028+4.266<.001.00332
UCECMIR3132 →+0.440+2.560.007.00732
SKCMFAM204DP →+0.037+2.244.002.00732
BLCAABCD1P4 →+0.375+4.320<.001.00232
UCECMIR7976 →+0.538+2.868<.001.00632
UCECAPI5P2 →+0.100+2.449.008.00932
Each partner links to its Q-omics profile. Showing the 6 strongest of 248 associations by consensus.

Exploration