C3orf56

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, C3orf56 mutation is significantly associated with the RNA expression of many other genes, with 799 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible C3orf56-associated genes across cancer lineages are NTAN1, MON1A, and CTU2. Each is linked with C3orf56 in more than 1 cancer types. Because this analysis shows association rather than direction, both C3orf56-to-partner and partner-to-C3orf56 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (C3orf56→partner) and Y-score (partner→C3orf56) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECNTAN1 →+0.640+2.616<.001.00532
UCECMON1A →+0.323+3.332.008.00532
UCECCTU2 →+0.430+2.332.002.00332
UCECNCAPH2 →+0.587+3.839<.001<.00132
UCECMSANTD3 →+0.473+2.332.008.00332
BLCARN7SL275P →+0.129+4.213<.001.00332
Each partner links to its Q-omics profile. Showing the 6 strongest of 799 associations by consensus.

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