C2CD4D

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, C2CD4D mutation is significantly associated with the RNA expression of many other genes, with 47 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible C2CD4D-associated genes across cancer lineages are MAGED4, KRTAP20-3, and LYZL1. Each is linked with C2CD4D in more than 1 cancer types. Because this analysis shows association rather than direction, both C2CD4D-to-partner and partner-to-C2CD4D results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (C2CD4D→partner) and Y-score (partner→C2CD4D) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECMAGED4 →+0.031+3.194.006.00332
UCECKRTAP20-3 →+0.136+5.475<.001.00132
CESCLYZL1 →+0.053+5.418<.001.00531
CESCRPL9P13 →+0.141+5.010<.001.00931
CESCDDX6P1 →+0.041+5.418<.001.00531
COADRNA5SP442 →+0.654+5.893<.001.00231
Each partner links to its Q-omics profile. Showing the 6 strongest of 47 associations by consensus.

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