C22orf42

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, C22orf42 mutation is significantly associated with the RNA expression of many other genes, with 3 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible C22orf42-associated genes across cancer lineages are GSG1L2, TBC1D3, and SLC36A3. Each is linked with C22orf42 in more than 1 cancer types. Because this analysis shows association rather than direction, both C22orf42-to-partner and partner-to-C22orf42 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (C22orf42→partner) and Y-score (partner→C22orf42) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaGSG1L2 →+0.043+4.969<.001.00331
LARGE_INTESTINETBC1D3 →+0.091+4.273<.001.00631
BLOOD_LeukemiaSLC36A3 →+0.024+4.564.004.00311
Each partner links to its Q-omics profile. Showing the 3 strongest of 3 associations by consensus.

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