C2

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, C2 mutation is significantly associated with the RNA expression of many other genes, with 179 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible C2-associated genes across cancer lineages are RNA5SP93, CTU2, and ZBTB8OS. Each is linked with C2 in more than 1 cancer types. Because this analysis shows association rather than direction, both C2-to-partner and partner-to-C2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNA5SP93 grouped by C2-low versus C2-high in STAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (C2→partner) and Y-score (partner→C2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STADRNA5SP93 →+0.349+3.830<.001.00632
UCECCTU2 →+0.626+3.332<.001.00531
UCECZBTB8OS →+0.497+3.201<.001.00931
UCECNUTF2P8 →+0.111+3.175.001.00231
UCECLINC01050 →+0.230+2.702.002.00431
UCECRNU6-86P →+0.438+2.717<.001.00731
Each partner links to its Q-omics profile. Showing the 6 strongest of 179 associations by consensus.

RNA5SP93 by C2 expression — STAD

Box plot of RNA5SP93 in C2-low vs C2-high samples in STAD.

Explore this box plot interactively →

Exploration