C1orf56

Across TCGA patient cohorts, C1orf56 mutation is significantly associated with the RNA expression of many other genes, with 87 significant associations in total. SKCM shows the largest number of these associations.

The most reproducible C1orf56-associated genes across cancer lineages are BMS1P15, RSL24D1P4, and LINC02796. Each is linked with C1orf56 in more than 1 cancer types. Because this analysis shows association rather than direction, both C1orf56-to-partner and partner-to-C1orf56 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, BMS1P15 grouped by C1orf56-low versus C1orf56-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (C1orf56→partner) and Y-score (partner→C1orf56) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	BMS1P15 →	+0.133	+3.575	.004	.009	3	2
BLCA	RSL24D1P4 →	+0.064	+5.722	<.001	.001	3	2
BLCA	LINC02796 →	+0.133	+4.535	<.001	.001	3	2
UCEC	MIR7702 →	+0.629	+6.060	<.001	<.001	3	1
SKCM	CHEK2P1 →	+0.125	+4.993	<.001	.002	3	1
SKCM	MIR6833 →	+0.823	+4.216	<.001	.001	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 87 associations by consensus.

BMS1P15 by C1orf56 expression — UCEC

Explore this box plot interactively →