C1orf127

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, C1orf127 mutation is significantly associated with the RNA expression of many other genes, with 57 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible C1orf127-associated genes across cancer lineages are TMEM239, TDRD15, and OR2F2. Each is linked with C1orf127 in more than 1 cancer types. Because this analysis shows association rather than direction, both C1orf127-to-partner and partner-to-C1orf127 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, TMEM239 grouped by C1orf127-low versus C1orf127-high in SOFT_TISSUE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (C1orf127→partner) and Y-score (partner→C1orf127) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SOFT_TISSUETMEM239 →+0.126+3.556.003.00731
OESOPHAGUSTDRD15 →+0.006+4.906<.001.00631
LUNG_NSCLC_LUADOR2F2 →+0.027+5.266<.001.00131
LUNG_NSCLC_LUADOR13C7 →+0.037+5.266<.001.00131
BLOOD_LeukemiaCASQ2 →+0.051+2.926<.001.00931
BLOOD_LeukemiaCPN1 →+0.187+4.083<.001.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 57 associations by consensus.

TMEM239 by C1orf127 expression — SOFT_TISSUE

Box plot of TMEM239 in C1orf127-low vs C1orf127-high samples in SOFT_TISSUE.

Explore this box plot interactively →

Exploration