C19orf47

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, C19orf47 protein abundance is significantly associated with the RNA expression of many other genes, with 6,743 significant associations in total. GBM shows the largest number of these associations.

The most reproducible C19orf47-associated genes across cancer lineages are ZNF850, AKT2, and SAMD4B. Each is linked with C19orf47 in more than 5 cancer types. Because this analysis shows association rather than direction, both C19orf47-to-partner and partner-to-C19orf47 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, C19orf47 versus ZNF850 in HNSC, with a Pearson correlation of 0.29.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (C19orf47→partner) and Y-score (partner→C19orf47) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCZNF850 →+0.626+0.208.005.00736
GBMAKT2 →+0.506+0.384<.001<.00135
LSCCSAMD4B →+0.488+0.250<.001<.00135
LSCCZNF567 →+0.520+0.388.001<.00135
LSCCUBA2 →+0.457+0.293.001.00135
UCECHASPIN →+0.788+0.248<.001.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,743 associations by consensus.

C19orf47 vs ZNF850 — HNSC

Per-sample scatter of C19orf47 vs ZNF850 in HNSC (Pearson r = 0.29).

Explore this scatter interactively →

Exploration