C19orf47

Across TCGA patient cohorts, C19orf47 mutation is significantly associated with the RNA expression of many other genes, with 1,573 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible C19orf47-associated genes across cancer lineages are RNVU1-33, LINC01523, and ISCA1P2. Each is linked with C19orf47 in more than 1 cancer types. Because this analysis shows association rather than direction, both C19orf47-to-partner and partner-to-C19orf47 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNVU1-33 grouped by C19orf47-low versus C19orf47-high in COAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (C19orf47→partner) and Y-score (partner→C19orf47) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
COAD	RNVU1-33 →	+0.662	+4.221	<.001	.003	3	2
COAD	LINC01523 →	+0.253	+4.484	<.001	.002	3	2
COAD	ISCA1P2 →	+0.251	+4.484	<.001	.002	3	2
COAD	SETP6 →	+0.261	+4.242	<.001	.003	3	2
COAD	RN7SL536P →	+0.215	+4.962	<.001	.003	3	2
BLCA	FAM197Y9 →	+0.037	+5.329	<.001	.006	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 1,573 associations by consensus.

RNVU1-33 by C19orf47 expression — COAD

Explore this box plot interactively →