C17orf80

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, C17orf80 mutation is significantly associated with the RNA expression of many other genes, with 1,035 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible C17orf80-associated genes across cancer lineages are PDCD2L, CAPN10, and L3MBTL2. Each is linked with C17orf80 in more than 1 cancer types. Because this analysis shows association rather than direction, both C17orf80-to-partner and partner-to-C17orf80 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, PDCD2L grouped by C17orf80-low versus C17orf80-high in SKCM.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (C17orf80→partner) and Y-score (partner→C17orf80) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMPDCD2L →+0.494+3.208.002.00932
SKCMCAPN10 →+0.489+3.198.003.00932
UCECL3MBTL2 →+0.362+2.947.001<.00132
UCECTRMU →+0.487+3.938<.001<.00132
UCECVPS18 →+0.643+3.721<.001<.00132
UCECPLEKHJ1 →+0.594+3.119<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,035 associations by consensus.

PDCD2L by C17orf80 expression — SKCM

Box plot of PDCD2L in C17orf80-low vs C17orf80-high samples in SKCM.

Explore this box plot interactively →

Exploration