C12orf56

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, C12orf56 mutation is significantly associated with the RNA expression of many other genes, with 1,798 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible C12orf56-associated genes across cancer lineages are RN7SKP286, OR2T35, and RN7SKP178. Each is linked with C12orf56 in more than 3 cancer types. Because this analysis shows association rather than direction, both C12orf56-to-partner and partner-to-C12orf56 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (C12orf56→partner) and Y-score (partner→C12orf56) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECRN7SKP286 →+0.056+4.397<.001<.00134
SCLCOR2T35 →+0.086+5.189.002.00633
SKCMRN7SKP178 →+0.029+3.784<.001.00933
SKCMMIR2053 →+0.204+4.110<.001.00532
BLCAOR4F21 →+0.077+4.899<.001.00532
HNSCRN7SKP6 →+0.104+7.954<.001.00832
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,798 associations by consensus.

Exploration